Apple Crisp Mini Cheesecakes

Section: Irresistible Desserts

Indulge in these mini desserts featuring creamy cheesecake filling, a buttery graham cracker base, and a generous topping of cinnamon-spiced apples with a crisp oat crumble. The layers combine for a balanced taste of tangy cream cheese and sweet apples, all finished with a decadent caramel drizzle. Each cupcake serves up a satisfying blend of textures—smooth, crunchy, and tender—in just a few bites. Perfect for gatherings or cozy nights in, these treats capture the essence of fall flavors without much fuss in the kitchen. Serve chilled for best flavor and texture.

Ranah
Created By Seham
Updated on Wed, 03 Dec 2025 10:02:49 GMT
A dessert with a caramel sauce and a dollop of whipped cream on top. Save
A dessert with a caramel sauce and a dollop of whipped cream on top. | bakeitgood.com

Apple Crisp Mini Cheesecakes are everything I crave as the leaves turn and apple season hits its stride. With sweet cinnamon apple filling, creamy cheesecake, buttery graham crust, and a crumbly oat topping, every bite brings fall bakery coziness in a portable cupcake size. These have quickly become my go-to for gatherings or just something special after Sunday dinner.

When I brought these to a family potluck, not one made it home—and everyone wanted the recipe and even my cheesecake-resistant cousin was converted. My kids now ask for them instead of birthday cake.

Ingredients

  • Graham cracker crumbs: provide that classic cheesecake crust and can be swapped for digestive biscuits if you are out
  • Sugar: both granulated and brown for sweetness and that bakery style contrast
  • Cinnamon and nutmeg: warm up the flavor and always smell inviting when baked
  • Unsalted butter: gives richness and keeps the crust and crumb topping crisp
  • All-purpose flour: adds structure to both topping and filling select unbleached for best texture
  • Quick-cooking oats: add crunch to the crumb topping and absorb extra apple juices
  • Fresh apples: crisp tart varieties like Granny Smith hold their shape while baking
  • Lemon juice: keeps apples from browning and amps up freshness
  • Cornstarch: thickens the apple layer so it does not get soggy
  • Cream cheese: softens to room temperature faster if cut into cubes first pick full-fat for creamiest filling
  • Vanilla: for depth always best to use pure extract if available
  • Egg: binds the cheesecake and makes it silky
  • Caramel sauce: optional but highly recommended for that finishing touch

Instructions

Prepare Pan and Oven:
Line a standard cupcake pan with paper liners for simple cleanup and perfect portions. Preheat your oven to 325 F to ensure gentle baking for the creamy cheesecake centers.
Mix and Press the Crust:
In a medium bowl use a fork to mix graham cracker crumbs with cinnamon and sugar to evenly distribute flavor. Stir in melted butter until every crumb is moist. Scoop nearly two tablespoons into each liner pressing firmly to create an even bottom crust. Chill in the fridge for best results.
Make the Crumb Topping:
Combine flour brown sugar oats cinnamon and nutmeg thoroughly so spices reach every bite. Add melted butter and toss with a fork until mixture looks like coarse pebbles and no dry bits remain. Refrigerate until needed so it stays crisp.
Prepare Cheesecake Filling:
Beat softened cream cheese with sugar vanilla and flour until completely smooth stopping to scrape bowl as needed. Add egg and mix only until just combined to keep filling delicate. Divide over crusts filling cups about two thirds full.
Apple Filling:
Toss peeled chopped apples with fresh lemon juice for brightness. Sprinkle in brown sugar cornstarch cinnamon and nutmeg making sure apples are evenly coated. Spoon apple mixture generously over cheesecake layer and press gently to flatten and fill right to the top.
Top with Oat Crumbs:
Sprinkle crumb topping thickly over apples patting gently so it stays atop during baking and forms a lovely golden crust.
Bake:
Place the pan in oven and bake for twenty eight to thirty minutes until centers look just set. Do not overbake or cheesecakes will become dry.
Cool and Chill:
Let cheesecakes cool thirty minutes in the pan so they firm up. Remove and transfer to the fridge for at least two hours so flavors meld and texture sets.
Serve:
For best flavor let stand at room temperature about fifteen minutes before serving. Finish with a drizzle of caramel sauce for extra indulgence.
A dessert with a dollop of whipped cream on top.
A dessert with a dollop of whipped cream on top. | bakeitgood.com

Baking these for my dad’s birthday, the whole kitchen smelled like his famous crumble apples from my childhood.

Storage tips

Store leftovers in an airtight container in the fridge for up to four days. To maintain the crumb topping’s crunch avoid stacking or covering directly with plastic. For longer storage freeze individually wrapped cheesecakes and thaw overnight in the fridge for best texture. If you need to refresh the topping’s crispness pop them under the broiler for a minute or two before serving.

Ingredient substitutions

No graham cracker crumbs Handy digestive biscuits or ginger snaps work fine. Swap apples for pears in a pinch. If you are dairy free try a vegan cream cheese such as Kite Hill and swap butter for plant based spread. Maple syrup drizzled as a finisher is a naturally sweet alternative to caramel sauce.

Serving suggestions

These mini cheesecakes are perfect for potlucks brunch buffets or Thanksgiving dessert tables. Pair with hot cider for a cozy snack. I especially love topping them with a dollop of lightly sweetened whipped cream or a scoop of vanilla bean ice cream for guests.

Cultural and historical context

Apple crisp and baked cheesecakes both have deep American roots. Cheesecakes were popularized in New York delis and the concept of crisp toppings comes from colonial era baking. These bites bring together two beloved dessert traditions into one modern treat.

Seasonal Adaptations

Use pears or peaches in spring for a lighter twist. Swap nuts into the topping for extra crunch in winter. Spike the apples with cardamom for a warming winter variation.

Success Stories

Friends have reported that these mini cheesecakes were the first thing to go at office parties. A neighbor made them for a baby shower and now requests them every autumn. Even picky eaters seem to love the mix of familiar flavors in a fun format.

Freezer Meal Conversion

Prepare and bake cheesecakes as instructed allowing to cool completely before freezing. Freeze on a baking sheet then transfer to an airtight container. Thaw overnight in the fridge and drizzle with caramel right before serving to restore the just baked freshness.

A dessert with a white topping and caramel drizzle.
A dessert with a white topping and caramel drizzle. | bakeitgood.com

Chill the cheesecakes before serving for best flavor and clean slices. A drizzle of caramel just before serving is the perfect finishing touch.

Common Recipe Questions

→ Can I use different apples for the filling?

Yes, tart varieties like Granny Smith work well, but you can substitute with sweeter apples for a softer texture and flavor.

→ Do I need to precook the apples?

No, simply toss the chopped apples in lemon juice and spices before layering. They soften perfectly during baking.

→ Is it possible to make these ahead?

Absolutely. Store chilled in the fridge for up to three days and add caramel sauce just before serving for the best presentation.

→ Can I freeze the cheesecakes?

These mini cheesecakes freeze well. Wrap tightly and thaw overnight in the refrigerator before serving.

→ What’s the best way to achieve the crumbly topping?

Be sure to use cold butter and mix oats, flour, and sugar until loose crumbs form before sprinkling over the apples.

→ How do I prevent the crust from getting soggy?

Press the graham mixture firmly and chill before adding fillings. This helps create a sturdy base that stays crisp.

Apple Crisp Mini Cheesecakes

Bite-sized cheesecakes with crisp apple layers, graham crust, and cinnamon oat topping—perfectly spiced.

Preparation Time
20 minutes
Cook Time
30 minutes
Total Cooking Time
50 minutes
Created By: Seham

Recipe Type: Irresistible Desserts

Difficulty Level: Moderate Level

Type of Cuisine: American

Portions: 9 Number of Servings (9 individual cheesecakes)

Dietary Options: Vegetarian-Friendly

Ingredients You'll Need

→ Graham Cracker Crust

01 90 grams graham cracker crumbs
02 20 grams granulated sugar
03 0.5 grams ground cinnamon
04 42 grams unsalted butter, melted

→ Crumb Topping

05 42 grams all-purpose flour
06 45 grams light brown sugar
07 30 grams quick-cooking oats
08 1.5 grams ground cinnamon
09 0.25 grams ground nutmeg
10 35 grams unsalted butter, melted

→ Apple Filling

11 2 medium apples, peeled and finely chopped
12 10 millilitres freshly squeezed lemon juice
13 4.5 grams ground cinnamon
14 0.5 grams ground nutmeg
15 28 grams light brown sugar
16 5 grams cornstarch

→ Cheesecake Filling

17 280 grams cream cheese, softened
18 72 grams granulated sugar
19 7 millilitres vanilla extract
20 5 grams all-purpose flour
21 1 large egg

→ For Serving

22 Caramel sauce, to drizzle

How to Make It

Step 01

Line a standard 12-cup muffin tin with 9 paper liners.

Step 02

Set oven to 165°C.

Step 03

Combine graham cracker crumbs, granulated sugar, and cinnamon. Stir in melted butter until mixture resembles damp sand.

Step 04

Firmly press approximately 2 tablespoons of crust mixture into the bottom of each liner. Chill in the refrigerator while preparing other components.

Step 05

Mix flour, light brown sugar, oats, cinnamon, and nutmeg. Stir in melted butter until mixture becomes coarse crumbs. Refrigerate until needed.

Step 06

Beat softened cream cheese with granulated sugar, vanilla extract, and flour until smooth. Add egg and blend until just combined.

Step 07

Spoon cheesecake mixture over prepared crusts, filling each liner about two-thirds full.

Step 08

Toss chopped apples with lemon juice. Add brown sugar, cornstarch, cinnamon, and nutmeg, stirring to coat evenly.

Step 09

Spoon apple filling on top of cheesecake layer, pressing apples gently to create an even layer.

Step 10

Generously sprinkle crumb topping over apples on each cheesecake.

Step 11

Bake for 28 to 30 minutes, until topping is golden and cheesecake is set.

Step 12

Allow cheesecakes to cool in the tin for 30 minutes. Remove from tin and refrigerate until thoroughly chilled.

Step 13

Before serving, drizzle each cheesecake with caramel sauce.

Extra Information

  1. For optimal texture, ensure cream cheese is fully softened before mixing.

Essential Tools

  • Standard muffin tin
  • Mixing bowls
  • Hand mixer or stand mixer
  • Measuring spoons and cups or kitchen scale
  • Rubber spatula

Allergy Warnings

Be sure to review every ingredient for potential allergens. Reach out to a healthcare provider if necessary.
  • Contains dairy, eggs, gluten

Nutrition Details (Per Portion)

This information is meant for educational use and shouldn't replace medical guidance.
  • Calorie Count: 340
  • Total Fats: 19 grams
  • Carbohydrate Content: 38 grams
  • Protein Amount: 5 grams